Tutorial Docking and ADMET notebook
Welcome to deeporigin
docking and ADMET prediction tutorial. For details on each function, please refer to the Documentation page. If anything in this tutorial or the documentation is unclear, please reach out to support@deeporigin.com.
Please refer to this documentation or use help()
buil-in Python function which provides help and detailed documentation on each function, e.g., help(docking client)
, help(Ligand)
, etc.
This tutorial combines the key steps for molecular docking using the deeporigin
package into one streamlined workflow. It covers fetching a PDB structure, preparing the protein (filling missing sidechains, building missing loops, protonating), preparing ligands (protonating), defining the docking site, performing docking, and predicting ADMET properties through proprietary models.
There are four main directories in this workflow:
docking_results
: This directory stores the combined docking outputs, including the prepared protein used in docking, SDF files of docked ligands, and predicted ADMET properties.example_files
: Contains example files to help you get started.pocket_results
: Holds the pocket information, such as CSV files with pocket data and PDB coordinates for each identified pocket.working_dir
: Stores the more granular files generated at each step of the workflow.
We start by importing deeporigin package and setting the primary interface objects including docking client
and pocket_finder_client
.
from deeporigin import *
docking_client = DockingClient()
pocket_finder_client = PocketFinderClient()
Protein Loading
We load the protein structure using one of three options: (1) fetching it via a known PDB ID from the RCSB PDB; (2) using a user-uploaded protein structure (e.g., one prepared elsewhere, a predicted model, or an unpublished structure); or (3) using a protein block.
For example, here we use option (1) to fetch the co-crystal structure of an FDA-approved TYK2 inhibitor BMS-986165 bound to the pseudokinase domain of protein available under PDB ID 6NZP. We then proceed to visualize the protein using the integrated Molstar viewer and review the relevant sections of the 6NZP entry from the PDB database. Note that this step is optional and primarily intended for initial analysis; the protein can also be loaded directly into docking_client
below.
PDB_ID = "6NZP"
protein = Protein(pdb_id=PDB_ID) ## Option 1: protein from PDB ID
# protein = Protein(file_path=protein_path) ## Option 2: protein from file
# protein = Protein(block_content=protein_content, block_type="pdb") ## Option 3: protein from string
protein.visualize()
protein
Moving forward with extracted file format pdb.
Ligand(s) Loading
We then load the ligands for docking using one of six methods: (1) an SDF file with one or more ligands, (2) a CSV file with one or more ligands in a column named “smiles,” (3) a PDB ligand identifier (e.g., “ATP”), (4) a MOL2 file containing one or more ligands, (5) a SMILES strings for one or more ligands, or (6) a ligand block.
In this example we load a csv file with SMILES for a preliminarily prepared set of 20 drug-like TYK2 inhibitors curated from Binding DB.
# ligands = Ligand.create_ligands_from_sdf('/home/bench-user/example-files/ligands/compounds.sdf') ## Option 1: ligands from sdf
ligands = Ligand.create_ligands_from_csv('tyk2-20-actives.csv') ## Option 2: ligands from csv
# ligand = Ligand(identifier="ATP") ## Option 3: ligand from identifier
# ligand = Ligand(file_path=ligand_mol2) ## Option 4: ligand from mol2
# ligand = Ligand(smiles="CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3ncnc4[nH]ccc34)cn2)C1") ## Option 5: ligand from smiles
# ligand = Ligand(block_content=ligand_block_content, block_type=ligand_block_type) ## Option 6: ligand from block
Ligand(s) Preparation for Docking
The uploaded ligands are charged and protonated at pH 7.4. This method assumes that the input ligand SMILES already include predefined tautomers and stereochemical configurations. We are actively working on adding tautomer and stereoisomer enumeration to expand the scope of supported ligand variations in the future.
ligands = Ligand.protonate_molecules(ligands)
Protonating Molecules: 100% 20/20 [00:28<00:00, 1.44s/it]
Protein and Crystal Ligand Preparation for Docking
We now return to processing the protein structure. Previously, we optionally fetched and reviewed the 6NZP structure; now, it is directly loaded into docking_client.prepare()
to prepare the protein and, optionally, the crystal ligand for docking. This step cleans HETATM records (while optionally retaining selected residue names via keep_resnames
, such as cofactor molecules), fills in missing atoms and sidechains, and, when model_loops
is set to True
, builds missing loops. It also adds endcaps, assigns charges, and protonates sidechains. By default, metal ions (e.g., Mg, Ca, Zn, Fe, Cu, Na, K, Hg, Co, U, Cd, Ni) are preserved, though selected metals can be removed using the remove_metals
option.
Subsequently, protein
and crystal_ligand
objects are created from the docking_data
object for use in docking.
In this example, we extract only chain A of 6NZP and optionally prepare the crystal ligand by specifying ligand_res_name="LB7"
. An empty string for ligand_res_name
prepares only the protein; however, including the crystal ligand offers the advantage of directly defining the docking site in the next step or performing self-docking with RMSD of docked vs crystal calculation.
docking_data = docking_client.prepare(
pdb_id="6NZP", ## Or pdb_file_path="structure.pdb" or protein=protein_obj
chains=["A"], ## Optional, can be removed and full assembly will be selected
ligand_res_name="LB7", ## Prepare the selected crystal ligand for docking
keep_resnames=[], ## Define strings of residue names (cofactors) to retain
remove_metals=[], ## Define strings of the metals to exclude from the default list
# model_loops=True, ## Add missing loops during protein preparation; default is False. This requires manually providing the protein's PDB ID for execution.
)
: File /home/bench-user/working_dir/proteins/6nzp_chains_A.pdb already exists. Overwriting.
: SMILES for LB7: CNC(=O)c1c(cc(nn1)NC(=O)C2CC2)Nc3cccc(c3OC)c4ncn(n4)C
: File /home/bench-user/working_dir/proteins/6nzp_chains_A_no_hetatm.pdb already exists. Overwriting.
print(docking_data)
{'ligand_res_name': 'LB7', 'raw_protein_path': PosixPath('/home/bench-user/working_dir/proteins/6nzp.pdb'), 'prepared_protein_path': '/home/bench-user/working_dir/proteins/prepared_for_LB7/6nzp_chains_A_no_hetatm_aligned.pdb', 'prepared_ligand_path': '/home/bench-user/working_dir/proteins/prepared_for_LB7/LB7_aligned.pdb'}
protein = Protein(file_path=docking_data["prepared_protein_path"]) # update with prepared protein object
crystal_ligand = Ligand(file_path=docking_data["prepared_ligand_path"]) # update with prepared crystal ligand object
Pocket Finder (Optional)
In this step, using our proprietary Pocket Finder we optionally search for pockets that are potentially druggable by small drug-like ligands. In this example, the method identifies five pockets in the previously prepared 6NZP chain A structure, displays them in different colors, and generates a dataframe containing pocket information such as druggability score, volume, hydrophobicity, etc. The associated CSV file and PDB coordinates of the pocket points are also saved in the pocket_results
directory.
Following pocket search in the next step of this workflow, a selected pocket identified by pocket search can be directly loaded in the pocket_data
for docking site definition. Note that this step is optional.
protein, pockets_report = pocket_finder_client.find_pockets(protein)
Output()
pocket_finder_client.show_pockets(protein=protein, pockets=pockets_report.pockets)
Moving forward with extracted file format pdb.
Moving forward with extracted file format pdb.
Moving forward with extracted file format pdb.
Moving forward with extracted file format pdb.
Moving forward with extracted file format pdb.
pockets_report
Pocket ID | Color | Drugability Score | Volume | Total SASA | Polar SASA | Polar/Apolar SASA Ratio | Hydrophobicity | Polarity | |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | red | 0.915 | 845.000 | 1466.769 | 810.085 | 1.234 | 23.596 | 22.000 |
1 | 2 | green | 0.859 | 54.000 | 333.878 | 101.348 | 0.535 | 50.444 | 2.000 |
2 | 3 | blue | 0.767 | 88.000 | 372.603 | 138.898 | 0.618 | 28.643 | 4.000 |
3 | 4 | yellow | 0.106 | 70.000 | 475.577 | 245.241 | 1.065 | 35.636 | 5.000 |
4 | 5 | magenta | 0.012 | 71.000 | 739.905 | 318.181 | 0.754 | 31.200 | 5.000 |
Creating Pocket Data
To define the docking site, we create a pocket_data
object. Four methods are available: (1) using a crystal structure ligand, (2) specifying protein residue ID(s), (3) selecting a pocket index from Pocket Finder, or (4) providing the pocket’s center via xyz coordinates. By default, box_size
sets a 24 Å grid box for ligand sampling. If defined by a crystal ligand or pocket points, optional padding
(with fit_box=True
) places the box walls 5 Å from the outermost points. All methods use PCA to align the pocket’s longest dimension with the grid box, ensuring optimal ligand sampling in docking.
# Option 1: Pocket data based on crystal structure
pocket_data = PocketData(
xref_protein=protein,
pocket=crystal_ligand,
fit_box=False, box_size=[24, 24, 24], # fit_box=True, padding=5.0
)
# Option 2: Pocket data based on residue ids
# pocket_data = PocketData.create_from_residues(
# xref_protein=protein,
# residue_ids=[805],
# fit_box=False, box_size=[24, 24, 24],
# )
# Option 3: Pocket data based on identified novel pocket
# pocket_data = PocketData(
# xref_protein=protein,
# pocket=pockets_report.pockets[0],
# fit_box=False, box_size=[24, 24, 24], # fit_box=True, padding=5.0
# )
# Option 4: Pocket data based on xyz coordinates
# pocket_data = PocketData(
# xref_protein=protein,
# pocket=[12.76, 23.27, 5.47],
# fit_box=False, box_size=[24, 24, 24],
# )
Docking Grid Box Visualization
Let's visualize the docking grid box from pocket_data
placed over our protein
and crystal_ligand
(or pocket points or protein residues) created in the previous steps.
pocket_data.show_box()
# Option: Display the box using manually provided protein data, which may differ from the xref protein.
# Setting raise_for_protein_mismatch=False ensures that any mismatches will be ignored.
# pocket_data.show_box(protein=protein, raise_for_protein_mismatch=False)
Docking
Now that we have prepared our ligands
, protein
, crystal_ligand
, and pocket_data
, it’s time to start the docking! For this we use docking_client.dock()
.
First, we will dock the crystal_ligand
and compute the RMSD between its docked and crystal poses to verify pose reproducibility (aiming for < 2.0 Å). By default, the docking step generates 16 poses, so calculate_rmsds_from_crystal
will report the RMSD for each of those 16 results.
Once the crystal pose is validated, we will proceed to dock the 20 active ligands
. Because the ligands
were already protonated in an earlier step, we’ll set protonate_ligands=False
. Keep in mind that you can pass [crystal_ligand]
or ligands
to the docking function as appropriate.
report = docking_client.dock(
protein=protein, ligands=[crystal_ligand], pocket_data=pocket_data,
protonate_ligands=False, ## protonate_ligands=True if ligands haven't been protonated above
# progress_only=True, ## Shows only progress bar
)
report.visualize(
crystal_ligand_path=crystal_ligand.file_path, crystal_ligand_format=crystal_ligand.block_type
)
: Docking request initiated. Request Info: {'request_id': 'docking_jl_jUvQNAXSDg', 'run_folder_path': '/home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_10_20250403180022', 'protein_file_path': '/home/bench-user/working_dir/proteins/6nzp_chains_A_no_hetatm_aligned.pdb'}
Output()
Output()
Completed: 100% | Elapsed Time: 00:28
report.results[0].calculate_rmsds_from_crystal(crystal_ligand)
[0.644979,
1.07075,
1.16899,
0.808348,
2.64066,
1.47574,
1.4391,
8.07531,
7.14763,
6.98756,
3.38308,
3.70625,
2.59157,
2.68066,
7.63127,
2.26155]
We successfully reproduced the crystal pose (green) with a docked pose (magenta) at an RMSD of ~0.65 Å, an excellent result that confirms the reliability of our docking setup. Having validated the protocol with the crystal ligand, we can now proceed to dock the 20 active ligands, setting ligands=ligands
as the input.
report = docking_client.dock(
protein=protein, ligands=ligands, pocket_data=pocket_data,
protonate_ligands=False, ## protonate_ligands=True if ligands haven't been protonated above
# progress_only=True, ## Shows only progress bar
)
: Docking request initiated. Request Info: {'request_id': 'docking_jl_DY1exAF4tE', 'run_folder_path': '/home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050', 'protein_file_path': '/home/bench-user/working_dir/proteins/6nzp_chains_A_no_hetatm_aligned.pdb'}
Output()
Completed: 100% | Elapsed Time: 03:32ime: 00:45
Docking Scores and Poses
Once the docking is complete, we can review the scores and poses for each ligand in the report. For each ligand, the highest-scoring pose is displayed alongside two primary metrics:
Ranking Score
This score reflects each ligand’s relative position (rank) among all ligands in a particular docking run. It does not necessarily indicate the absolute best pose or conformation for that ligand in isolation but helps compare ligands against each other.
Binding Energy
This value (in kcal/mol) estimates the interaction strength between the ligand and the protein. More negative values typically imply stronger binding affinity, suggesting a more favorable interaction.
report
# include other properties of the top ligand
# report.generate_custom_report(include_props=True)
Image | SMILES | Ranking Score | Binding Energy | Path To Docked Pose | |
---|---|---|---|---|---|
0 | CNc1cc(Nc2cccn(-c3cccnc3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 50.579 | -9.357 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_1/candidate_solution_1.sdf | |
1 | CNc1cc(Nc2cccn([C@H]3CC[C@@H](OC)CC3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 50.388 | -8.771 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_17/candidate_solution_1.sdf | |
2 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 50.276 | -8.127 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_14/candidate_solution_1.sdf | |
3 | CNc1cc(Nc2cccn(-c3ocnc3C)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.950 | -9.013 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_5/candidate_solution_1.sdf | |
4 | CNc1cc(Nc2cccn(-c3ccc(F)cn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.832 | -8.063 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_3/candidate_solution_1.sdf | |
5 | CNc1cc(Nc2cccn([C@H]3C[C@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.547 | -9.450 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_6/candidate_solution_1.sdf | |
6 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.390 | -9.108 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_12/candidate_solution_1.sdf | |
7 | CNc1cc(Nc2cccn(C3CC[NH+](CCF)CC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.221 | -7.188 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_11/candidate_solution_1.sdf | |
8 | CNc1cc(Nc2cccn([C@H]3C[C@@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.191 | -7.732 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_7/candidate_solution_1.sdf | |
9 | CNc1cc2nn3c(cnc13)C(=O)N[C@H](C)COCc1ccc(OC)c(c1)N2 | 49.183 | -9.014 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_8/candidate_solution_1.sdf | |
10 | CNc1cc(Nc2cccn([C@@H]3CCCOC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.179 | -9.481 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_16/candidate_solution_1.sdf | |
11 | CNc1cc(Nc2cccn(C3CCOCC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.103 | -9.324 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_15/candidate_solution_1.sdf | |
12 | CNc1cc(Nc2cccn(C(C)C)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.087 | -7.206 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_13/candidate_solution_1.sdf | |
13 | CNC(=O)c1nnc(Nc2ccc(N3CC(O)C3)cn2)cc1Nc1cccc(-c2ncn(C)n2)c1OC | 49.064 | -10.073 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_19/candidate_solution_1.sdf | |
14 | CNc1cc(Nc2cccn(-c3nc(C)co3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.051 | -8.115 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_4/candidate_solution_1.sdf | |
15 | CNc1cc(Nc2cccn(-c3cncc(F)c3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.019 | -8.047 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_20/candidate_solution_1.sdf | |
16 | CNc1cc2nn3c(cnc13)C(=O)N[C@@H]1CCC[C@H]1OCc1cc(c3nnn(C)c3c1)N2 | 48.941 | -9.282 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_9/candidate_solution_1.sdf | |
17 | CNc1cc(Nc2cccn(-c3cnc(C)o3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 48.931 | -8.309 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_2/candidate_solution_1.sdf | |
18 | CNc1cc(Nc2cccn(-c3ncccc3F)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 48.930 | -7.715 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_10/candidate_solution_1.sdf | |
19 | CNc1cc(Nc2cccn(-c3ncco3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 48.916 | -9.176 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_18/candidate_solution_1.sdf |
We then visualize the poses of the 20 ligands together with or separstely from the crystal ligand.
# report.visualize()
report.visualize(crystal_ligand_path=crystal_ligand.file_path, crystal_ligand_format=crystal_ligand.block_type) ## crystal ligand overlayed
ADMET predictions and Append to Docking Results
Now advance the docked molecules to ADMET properties prediction using proprietary deeporigin models through admet_properties()
for result in report.results:
result.top_ligand.admet_properties()
# Docking report with calculated admet properties
report.generate_custom_report(include_props=True)
Image | SMILES | Ranking Score | Binding Energy | cyp2c9 | hERG | logP | cyp1a2 | cyp3a4 | cyp2d6 | logS | cyp2c19 | ames | logD | Path To Docked Pose | Pose Score | SCORE | BindingDB Reactant_set_id | pAffinity | ligands_per_article | Article DOI | Kd (nM) | Ligand InChI | Ligand InChI Key | BindingDB MonomerID | BindingDB Ligand Name | Target Name | Target Source Organism According to Curator or DataSource | Curation/DataSource | BindingDB Entry DOI | PMID | Link to Ligand in BindingDB | Link to Target in BindingDB | Link to Ligand-Target Pair in BindingDB | PubChem CID | PubChem SID | Number of Protein Chains in Target ( | BindingDB Target Chain Sequence | PDB ID(s) of Target Chain | UniProt_Name | UniProt_ID | UniProt (SwissProt) Secondary ID(s) of Target Chain | Smiles (Canonical) (Murcko) | SlogP | SMR | LabuteASA | TPSA | AMW | ExactMW | NumLipinskiHBA | NumLipinskiHBD | NumRotatableBonds | NumHBD | NumHBA | NumAmideBonds | NumHeteroAtoms | NumHeavyAtoms | NumAtoms | NumStereocenters | NumUnspecifiedStereocenters | NumRings | NumAromaticRings | NumSaturatedRings | NumAliphaticRings | NumAromaticHeterocycles | NumSaturatedHeterocycles | NumAliphaticHeterocycles | NumAromaticCarbocycles | NumSaturatedCarbocycles | NumAliphaticCarbocycles | FractionCSP3 | UniProt (SwissProt) Recommended Name of Target Chain | Racemate (Smiles (Canonical)) | ProtonatedSMILES | Ligand HET ID in PDB | PDB ID(s) for Ligand-Target Complex | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | CNc1cc(Nc2cccn(-c3cccnc3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 50.579 | -9.357 | 0.624 | 0.586 | 1.828 | 0.393 | 0.708 | 0.374 | -4.272 | 0.467 | 0.000 | 1.660 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_1/candidate_solution_1.sdf | 0.813 | -11.763 | 51538440 | 12.000 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.001 | InChI=1S/C23H24N8O3/c1-24-20-11-19(27-17-6-4-10-30(23(17)33)14-5-3-9-25-12-14)29-21-15(13-26-31(20)21)22(32)28-16-7-8-18(16)34-2/h3-6,9-13,16,18,24H,7-8H2,1-2H3,(H,27,29)(H,28,32)/t16-,18-/m0/s1 | BAJDVLSQXRMOPJ-WMZOPIPTSA-N | 424409 | US10508120, Compound I-864::US10508120, Compound I-922::US10577373, Compound I-922::US11046698, Compound I-922 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424409 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424409&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137449680.000 | 434150110.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 1.968 | 126.936 | 194.356 | 127.470 | 460.498 | 460.197 | 11 | 3 | 7 | 3 | 10 | 1 | 11 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3cccnc3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3cccnc3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
1 | CNc1cc(Nc2cccn([C@H]3CC[C@@H](OC)CC3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 50.388 | -8.771 | 0.715 | 0.879 | 2.543 | 0.580 | 0.694 | 0.594 | -3.981 | 0.530 | 0.000 | 2.103 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_17/candidate_solution_1.sdf | 0.767 | -13.188 | 51538451 | 11.398 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.004 | InChI=1S/C25H33N7O4/c1-26-22-13-21(28-19-5-4-12-31(25(19)34)15-6-8-16(35-2)9-7-15)30-23-17(14-27-32(22)23)24(33)29-18-10-11-20(18)36-3/h4-5,12-16,18,20,26H,6-11H2,1-3H3,(H,28,30)(H,29,33)/t15-,16+,18-,20-/m1/s1 | RWTRNTPHYFRFAB-YNVMFWSZSA-N | 50618789 | CHEMBL5438635 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=50618789 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=50618789&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | nan | nan | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 2.714 | 136.106 | 208.741 | 123.810 | 495.584 | 495.259 | 11 | 3 | 8 | 3 | 10 | 1 | 11 | 36 | 69 | 2 | 0 | 5 | 3 | 2 | 2 | 3 | 0 | 0 | 0 | 2 | 2 | 0.520 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn([CH]3CC[CH](OC)CC3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn([C@H]3CC[C@@H](OC)CC3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | nan | nan | |
2 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 50.276 | -8.127 | 0.610 | 0.898 | 2.041 | 0.540 | 0.580 | 0.397 | -4.276 | 0.460 | 0.000 | 2.063 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_14/candidate_solution_1.sdf | 0.682 | -11.219 | 51538438 | 11.398 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.004 | InChI=1S/C23H24N8O3/c1-24-20-12-18(27-16-6-5-11-30(23(16)33)19-7-3-4-10-25-19)29-21-14(13-26-31(20)21)22(32)28-15-8-9-17(15)34-2/h3-7,10-13,15,17,24H,8-9H2,1-2H3,(H,27,29)(H,28,32)/t15-,17-/m0/s1 | BWINBHTTZLVXGT-RDJZCZTQSA-N | 424454 | US10508120, Compound I-1183::US10508120, Compound I-909::US10577373, Compound I-1183::US11046698, Compound I-1183::US11414431, Compound I-263 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424454 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424454&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137441496.000 | 434150143.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 1.968 | 126.936 | 194.356 | 127.470 | 460.498 | 460.197 | 11 | 3 | 7 | 3 | 10 | 1 | 11 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
3 | CNc1cc(Nc2cccn(-c3ocnc3C)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.950 | -9.013 | 0.596 | 0.887 | 1.591 | 0.513 | 0.534 | 0.497 | -4.161 | 0.341 | 0.000 | 2.065 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_5/candidate_solution_1.sdf | 0.732 | -12.615 | 51538447 | 11.699 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.002 | InChI=1S/C22H24N8O4/c1-12-22(34-11-24-12)29-8-4-5-15(21(29)32)26-17-9-18(23-2)30-19(28-17)13(10-25-30)20(31)27-14-6-7-16(14)33-3/h4-5,8-11,14,16,23H,6-7H2,1-3H3,(H,26,28)(H,27,31)/t14-,16-/m1/s1 | FOMVODDBRHPISP-GDBMZVCRSA-N | 424815 | US10508120, Compound I-1319::US10577373, Compound I-1319::US11046698, Compound I-1319 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424815 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424815&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 146383391.000 | 434150439.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCC4)C3C)CC21 | 1.869 | 123.939 | 193.515 | 140.610 | 464.486 | 464.192 | 12 | 3 | 7 | 3 | 11 | 1 | 12 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.318 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ocnc3C)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ocnc3C)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | nan | nan | |
4 | CNc1cc(Nc2cccn(-c3ccc(F)cn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.832 | -8.063 | 0.670 | 0.966 | 2.477 | 0.555 | 0.597 | 0.624 | -4.320 | 0.546 | 0.000 | 2.251 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_3/candidate_solution_1.sdf | 0.691 | -11.161 | 51538439 | 11.699 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.002 | InChI=1S/C23H23FN8O3/c1-25-20-10-18(28-16-4-3-9-31(23(16)34)19-8-5-13(24)11-26-19)30-21-14(12-27-32(20)21)22(33)29-15-6-7-17(15)35-2/h3-5,8-12,15,17,25H,6-7H2,1-2H3,(H,28,30)(H,29,33)/t15-,17-/m1/s1 | SBIHNURLSLKECO-NVXWUHKLSA-N | 424362 | US10508120, Compound I-817::US10508120, Compound I-927::US10577373, Compound I-927::US11046698, Compound I-817 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424362 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424362&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 146383348.000 | 434150072.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 2.107 | 126.894 | 198.521 | 127.470 | 478.488 | 478.188 | 11 | 3 | 7 | 3 | 10 | 1 | 12 | 35 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ccc(F)cn3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ccc(F)cn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | nan | nan | |
5 | CNc1cc(Nc2cccn([C@H]3C[C@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.547 | -9.450 | 0.722 | 0.943 | 1.674 | 0.483 | 0.694 | 0.586 | -4.333 | 0.605 | 0.000 | 1.656 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_6/candidate_solution_1.sdf | 0.836 | -13.498 | 51538453 | 11.699 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.002 | InChI=1S/C23H29N7O4/c1-24-20-11-19(26-17-5-4-8-29(23(17)32)13-9-14(10-13)33-2)28-21-15(12-25-30(20)21)22(31)27-16-6-7-18(16)34-3/h4-5,8,11-14,16,18,24H,6-7,9-10H2,1-3H3,(H,26,28)(H,27,31)/t13-,14-,16-,18-/m0/s1 | JKRUNZGYOLBZSN-DNUAJFIVSA-N | 565687 | US11414431, Compound I-255 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=565687 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=565687&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 146560353.000 | 472627433.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCC4)C3C)CC21 | 1.933 | 126.872 | 196.011 | 123.810 | 467.530 | 467.228 | 11 | 3 | 8 | 3 | 10 | 1 | 11 | 34 | 63 | 2 | 0 | 5 | 3 | 2 | 2 | 3 | 0 | 0 | 0 | 2 | 2 | 0.478 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn([CH]3C[CH](OC)C3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn([C@H]3C[C@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
6 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 49.390 | -9.108 | 0.573 | 0.898 | 2.344 | 0.551 | 0.563 | 0.413 | -4.284 | 0.422 | 0.000 | 2.008 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_12/candidate_solution_1.sdf | 0.739 | -12.654 | 51561816 | 11.523 | 10 | 10.1021/acs.jmedchem.3c00926 | 0.003 | InChI=1S/C23H24N8O3/c1-24-20-12-18(27-16-6-5-11-30(23(16)33)19-7-3-4-10-25-19)29-21-14(13-26-31(20)21)22(32)28-15-8-9-17(15)34-2/h3-7,10-13,15,17,24H,8-9H2,1-2H3,(H,27,29)(H,28,32)/t15-,17-/m1/s1 | BWINBHTTZLVXGT-NVXWUHKLSA-N | 424361 | US10508120, Compound I-816::US10508120, Compound I-908::US10577373, Compound I-908::US11046698, Compound I-816::US11414431, Compound I-264 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2D50SCH | 37578217 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424361 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424361&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137441492.000 | 434150071.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 1.968 | 126.936 | 194.356 | 127.470 | 460.498 | 460.197 | 11 | 3 | 7 | 3 | 10 | 1 | 11 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ccccn3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | ZSB | 8S9A | |
7 | CNc1cc(Nc2cccn(C3CC[NH+](CCF)CC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.221 | -7.188 | 0.552 | 0.973 | 1.737 | 0.271 | 0.849 | 0.660 | -2.436 | 0.568 | 0.750 | 0.704 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_11/candidate_solution_1.sdf | 0.729 | -11.390 | 51538452 | 11.523 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.003 | InChI=1S/C25H33FN8O3/c1-27-22-14-21(31-23-17(15-28-34(22)23)24(35)30-18-5-6-20(18)37-2)29-19-4-3-10-33(25(19)36)16-7-11-32(12-8-16)13-9-26/h3-4,10,14-16,18,20,27H,5-9,11-13H2,1-2H3,(H,29,31)(H,30,35)/t18-,20-/m0/s1 | QQDCXJUNZPNBHD-ICSRJNTNSA-N | 424662 | US10508120, Compound I-1117::US10577373, Compound I-1117::US11046698, Compound I-1117 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424662 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424662&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137449801.000 | 434150313.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 2.190 | 138.490 | 213.553 | 117.820 | 512.590 | 512.266 | 11 | 3 | 9 | 3 | 10 | 1 | 12 | 37 | 70 | 2 | 0 | 5 | 3 | 2 | 2 | 3 | 1 | 1 | 0 | 1 | 1 | 0.520 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(C3CCN(CCF)CC3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(C3CC[NH+](CCF)CC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
8 | CNc1cc(Nc2cccn([C@H]3C[C@@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.191 | -7.732 | 0.722 | 0.943 | 1.674 | 0.483 | 0.694 | 0.586 | -4.333 | 0.605 | 0.000 | 1.656 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_7/candidate_solution_1.sdf | 0.749 | -11.881 | 51538454 | 11.699 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.002 | InChI=1S/C23H29N7O4/c1-24-20-11-19(26-17-5-4-8-29(23(17)32)13-9-14(10-13)33-2)28-21-15(12-25-30(20)21)22(31)27-16-6-7-18(16)34-3/h4-5,8,11-14,16,18,24H,6-7,9-10H2,1-3H3,(H,26,28)(H,27,31)/t13-,14+,16-,18-/m0/s1 | JKRUNZGYOLBZSN-KPEUIFRASA-N | 565685 | US11414431, Compound I-253 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=565685 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=565685&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 146560353.000 | 472627431.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCC4)C3C)CC21 | 1.933 | 126.872 | 196.011 | 123.810 | 467.530 | 467.228 | 11 | 3 | 8 | 3 | 10 | 1 | 11 | 34 | 63 | 2 | 0 | 5 | 3 | 2 | 2 | 3 | 0 | 0 | 0 | 2 | 2 | 0.478 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn([CH]3C[CH](OC)C3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn([C@H]3C[C@@H](OC)C3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
9 | CNc1cc2nn3c(cnc13)C(=O)N[C@H](C)COCc1ccc(OC)c(c1)N2 | 49.183 | -9.014 | 0.696 | 0.111 | 1.608 | 0.634 | 0.671 | 0.549 | -3.684 | 0.561 | 0.154 | 2.179 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_8/candidate_solution_1.sdf | 0.760 | -10.217 | 51572766 | 11.699 | 27 | 10.1021/acs.jmedchem.2c01800 | 0.002 | InChI=1S/C19H22N6O3/c1-11-9-28-10-12-4-5-16(27-3)13(6-12)23-17-7-14(20-2)18-21-8-15(19(26)22-11)25(18)24-17/h4-8,11,20H,9-10H2,1-3H3,(H,22,26)(H,23,24)/t11-/m1/s1 | ZOLAUNOTNQPHOB-LLVKDONJSA-N | 50632579 | CHEMBL5424894 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2BP0783 | 36951608 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=50632579 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=50632579&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | nan | nan | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC1CCCCCC2CCCC(C2)CC2CCC3CCC1C3C2 | 2.172 | 105.395 | 161.601 | 101.810 | 382.424 | 382.175 | 9 | 3 | 2 | 3 | 8 | 1 | 9 | 28 | 50 | 1 | 0 | 4 | 3 | 0 | 1 | 2 | 0 | 1 | 1 | 0 | 0 | 0.316 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc2nn3c(cnc13)C(=O)N[CH](C)COCc1ccc(OC)c(c1)N2 | CNc1cc2nn3c(cnc13)C(=O)N[C@H](C)COCc1ccc(OC)c(c1)N2 | nan | nan | |
10 | CNc1cc(Nc2cccn([C@@H]3CCCOC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.179 | -9.481 | 0.720 | 0.794 | 1.811 | 0.578 | 0.691 | 0.594 | -4.671 | 0.507 | 0.000 | 1.673 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_16/candidate_solution_1.sdf | 0.783 | -12.083 | 51538450 | 11.398 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.004 | InChI=1S/C23H29N7O4/c1-24-20-11-19(26-17-6-3-9-29(23(17)32)14-5-4-10-34-13-14)28-21-15(12-25-30(20)21)22(31)27-16-7-8-18(16)33-2/h3,6,9,11-12,14,16,18,24H,4-5,7-8,10,13H2,1-2H3,(H,26,28)(H,27,31)/t14-,16+,18+/m1/s1 | XEMJIVRAXNWOMV-HFTRVMKXSA-N | 424448 | US10508120, Compound I-903::US10577373, Compound I-903::US11046698, Compound I-903 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424448 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424448&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137441491.000 | 434150140.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 1.935 | 126.894 | 196.011 | 123.810 | 467.530 | 467.228 | 11 | 3 | 7 | 3 | 10 | 1 | 11 | 34 | 63 | 3 | 0 | 5 | 3 | 2 | 2 | 3 | 1 | 1 | 0 | 1 | 1 | 0.478 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn([CH]3CCCOC3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn([C@@H]3CCCOC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
11 | CNc1cc(Nc2cccn(C3CCOCC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.103 | -9.324 | 0.741 | 0.813 | 2.014 | 0.523 | 0.712 | 0.579 | -4.644 | 0.633 | 0.000 | 1.574 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_15/candidate_solution_1.sdf | 0.797 | -12.866 | 51538448 | 11.398 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.004 | InChI=1S/C23H29N7O4/c1-24-20-12-19(26-17-4-3-9-29(23(17)32)14-7-10-34-11-8-14)28-21-15(13-25-30(20)21)22(31)27-16-5-6-18(16)33-2/h3-4,9,12-14,16,18,24H,5-8,10-11H2,1-2H3,(H,26,28)(H,27,31)/t16-,18-/m0/s1 | FRAVSOXFUNLDOW-WMZOPIPTSA-N | 424559 | US10508120, Compound I-1014::US10508120, Compound I-1353::US10577373, Compound I-1014::US11046698, Compound I-1353 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424559 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424559&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137449271.000 | 434150230.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 1.935 | 126.894 | 196.011 | 123.810 | 467.530 | 467.228 | 11 | 3 | 7 | 3 | 10 | 1 | 11 | 34 | 63 | 2 | 0 | 5 | 3 | 2 | 2 | 3 | 1 | 1 | 0 | 1 | 1 | 0.478 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(C3CCOCC3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(C3CCOCC3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
12 | CNc1cc(Nc2cccn(C(C)C)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.087 | -7.206 | 0.705 | 0.522 | 1.844 | 0.551 | 0.652 | 0.537 | -2.758 | 0.552 | 0.000 | 1.991 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_13/candidate_solution_1.sdf | 0.771 | -10.426 | 51538437 | 11.398 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.004 | InChI=1S/C21H27N7O3/c1-12(2)27-9-5-6-15(21(27)30)24-17-10-18(22-3)28-19(26-17)13(11-23-28)20(29)25-14-7-8-16(14)31-4/h5-6,9-12,14,16,22H,7-8H2,1-4H3,(H,24,26)(H,25,29)/t14-,16-/m0/s1 | JVISIDUCQNAVTF-HOCLYGCPSA-N | 424525 | US10508120, Compound I-980::US10577373, Compound I-980::US11046698, Compound I-980 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424525 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424525&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137449741.000 | 434150201.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC1CCCCC1CC1CCC2CCC(C(C)CC3CCC3)C2C1 | 2.164 | 118.189 | 179.174 | 114.580 | 425.493 | 425.218 | 10 | 3 | 7 | 3 | 9 | 1 | 10 | 31 | 58 | 2 | 0 | 4 | 3 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 1 | 0.429 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(C(C)C)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(C(C)C)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
13 | CNC(=O)c1nnc(Nc2ccc(N3CC(O)C3)cn2)cc1Nc1cccc(-c2ncn(C)n2)c1OC | 49.064 | -10.073 | 0.815 | 0.389 | 2.915 | 0.600 | 0.729 | 0.657 | -2.367 | 0.767 | 0.003 | 2.084 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_19/candidate_solution_1.sdf | 0.648 | -13.428 | 51572730 | 11.301 | 27 | 10.1021/acs.jmedchem.2c01800 | 0.005 | InChI=1S/C24H26N10O3/c1-25-24(36)21-18(28-17-6-4-5-16(22(17)37-3)23-27-13-33(2)32-23)9-20(30-31-21)29-19-8-7-14(10-26-19)34-11-15(35)12-34/h4-10,13,15,35H,11-12H2,1-3H3,(H,25,36)(H2,26,28,29,30)/i1D3 | MKCRMYBGJIPMII-FIBGUPNXSA-N | 50632576 | CHEMBL5439447 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2BP0783 | 36951608 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=50632576 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=50632576&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | nan | nan | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | C1CC(CC2CCC(C3CCC3)CC2)CC(CC2CCCC(C3CCCC3)C2)C1 | 1.703 | 137.435 | 216.299 | 155.240 | 505.557 | 505.238 | 13 | 4 | 9 | 4 | 12 | 1 | 13 | 37 | 63 | 0 | 0 | 5 | 4 | 1 | 1 | 3 | 1 | 1 | 1 | 0 | 0 | 0.250 | Non-receptor tyrosine-protein kinase TYK2 | [2H]C([2H])([2H])NC(=O)c1nnc(Nc2ccc(N3CC(O)C3)cn2)cc1Nc1cccc(-c2ncn(C)n2)c1OC | CNC(=O)c1nnc(Nc2ccc(N3CC(O)C3)cn2)cc1Nc1cccc(-c2ncn(C)n2)c1OC | nan | nan | |
14 | CNc1cc(Nc2cccn(-c3nc(C)co3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.051 | -8.115 | 0.562 | 0.670 | 1.040 | 0.523 | 0.516 | 0.396 | -4.121 | 0.347 | 0.000 | 1.934 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_4/candidate_solution_1.sdf | 0.698 | -11.053 | 51538445 | 11.699 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.002 | InChI=1S/C22H24N8O4/c1-12-11-34-22(25-12)29-8-4-5-15(21(29)32)26-17-9-18(23-2)30-19(28-17)13(10-24-30)20(31)27-14-6-7-16(14)33-3/h4-5,8-11,14,16,23H,6-7H2,1-3H3,(H,26,28)(H,27,31)/t14-,16-/m0/s1 | XHBUSPMQECXZAQ-HOCLYGCPSA-N | 424435 | US10508120, Compound I-890::US10508120, Compound I-975::US10577373, Compound I-975::US11046698, Compound I-890 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424435 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424435&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137450011.000 | 434150130.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCC4)C3C)CC21 | 1.869 | 123.939 | 193.515 | 140.610 | 464.486 | 464.192 | 12 | 3 | 7 | 3 | 11 | 1 | 12 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.318 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3nc(C)co3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3nc(C)co3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
15 | CNc1cc(Nc2cccn(-c3cncc(F)c3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 49.019 | -8.047 | 0.700 | 0.857 | 1.893 | 0.421 | 0.679 | 0.562 | -4.309 | 0.574 | 0.000 | 2.020 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_20/candidate_solution_1.sdf | 0.701 | -11.360 | 51538443 | 11.222 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.006 | InChI=1S/C23H23FN8O3/c1-25-20-9-19(28-17-4-3-7-31(23(17)34)14-8-13(24)10-26-11-14)30-21-15(12-27-32(20)21)22(33)29-16-5-6-18(16)35-2/h3-4,7-12,16,18,25H,5-6H2,1-2H3,(H,28,30)(H,29,33)/t16-,18-/m0/s1 | ZZNBYQLHUDAQNR-WMZOPIPTSA-N | 424529 | US10508120, Compound I-1084::US10508120, Compound I-984::US10577373, Compound I-1084::US11046698, Compound I-1084 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424529 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424529&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137449220.000 | 434150204.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 2.107 | 126.894 | 198.521 | 127.470 | 478.488 | 478.188 | 11 | 3 | 7 | 3 | 10 | 1 | 12 | 35 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3cncc(F)c3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3cncc(F)c3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan | |
16 | CNc1cc2nn3c(cnc13)C(=O)N[C@@H]1CCC[C@H]1OCc1cc(c3nnn(C)c3c1)N2 | 48.941 | -9.282 | 0.331 | 0.078 | 1.402 | 0.609 | 0.485 | 0.287 | -4.454 | 0.176 | 0.388 | 2.238 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_9/candidate_solution_1.sdf | 0.698 | -9.885 | 51572767 | 11.699 | 27 | 10.1021/acs.jmedchem.2c01800 | 0.002 | InChI=1S/C21H23N9O2/c1-22-14-8-18-24-13-6-11(7-15-19(13)26-28-29(15)2)10-32-17-5-3-4-12(17)25-21(31)16-9-23-20(14)30(16)27-18/h6-9,12,17,22H,3-5,10H2,1-2H3,(H,24,27)(H,25,31)/t12-,17-/m1/s1/i2D3 | SXYCXSLUFMWJMT-ZLPYKLTMSA-N | 50632583 | CHEMBL5403297 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2BP0783 | 36951608 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=50632583 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=50632583&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | nan | nan | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC1C[C@@H]2CCC[C@H]2CCC2CC3CCCC3C(C2)CC2CCC3CCC1C3C2 | 1.977 | 118.008 | 186.904 | 123.290 | 436.494 | 436.216 | 11 | 3 | 2 | 3 | 10 | 1 | 11 | 32 | 55 | 2 | 0 | 6 | 4 | 1 | 2 | 3 | 0 | 1 | 1 | 1 | 1 | 0.381 | Non-receptor tyrosine-protein kinase TYK2 | [2H]C([2H])([2H])n1nnc2c3cc(cc21)CO[CH]1CCC[CH]1NC(=O)c1cnc2c(NC)cc(nn12)N3 | CNc1cc2nn3c(cnc13)C(=O)N[C@@H]1CCC[C@H]1OCc1cc(c3nnn(C)c3c1)N2 | nan | nan | |
17 | CNc1cc(Nc2cccn(-c3cnc(C)o3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 48.931 | -8.309 | 0.653 | 0.698 | 1.744 | 0.572 | 0.591 | 0.597 | -4.169 | 0.442 | 0.000 | 2.129 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_2/candidate_solution_1.sdf | 0.720 | -12.486 | 51538446 | 12.000 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.001 | InChI=1S/C22H24N8O4/c1-12-24-11-19(34-12)29-8-4-5-15(22(29)32)26-17-9-18(23-2)30-20(28-17)13(10-25-30)21(31)27-14-6-7-16(14)33-3/h4-5,8-11,14,16,23H,6-7H2,1-3H3,(H,26,28)(H,27,31)/t14-,16-/m1/s1 | UKWRWROHRKULGZ-GDBMZVCRSA-N | 424440 | US10508120, Compound I-1074::US10508120, Compound I-895::US10577373, Compound I-1074::US11046698, Compound I-1074 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424440 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424440&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 139425638.000 | 434150135.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCC4)C3C)CC21 | 1.869 | 123.939 | 193.515 | 140.610 | 464.486 | 464.192 | 12 | 3 | 7 | 3 | 11 | 1 | 12 | 34 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.318 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3cnc(C)o3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3cnc(C)o3)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | nan | nan | |
18 | CNc1cc(Nc2cccn(-c3ncccc3F)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | 48.930 | -7.715 | 0.648 | 0.886 | 2.127 | 0.424 | 0.588 | 0.546 | -4.320 | 0.540 | 0.000 | 2.344 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_10/candidate_solution_1.sdf | 0.748 | -10.328 | 51538425 | 11.523 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.003 | InChI=1S/C23H23FN8O3/c1-25-19-11-18(28-16-6-4-10-31(23(16)34)21-14(24)5-3-9-26-21)30-20-13(12-27-32(19)20)22(33)29-15-7-8-17(15)35-2/h3-6,9-12,15,17,25H,7-8H2,1-2H3,(H,28,30)(H,29,33)/t15-,17-/m1/s1 | ONNBUGHQPXRHTD-NVXWUHKLSA-N | 424408 | US10508120, Compound I-863::US10508120, Compound I-904::US10577373, Compound I-904::US11046698, Compound I-904::US11414431, Compound I-266 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424408 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424408&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137441576.000 | 434150109.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCCC4)C3C)CC21 | 2.107 | 126.894 | 198.521 | 127.470 | 478.488 | 478.188 | 11 | 3 | 7 | 3 | 10 | 1 | 12 | 35 | 58 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.261 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ncccc3F)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ncccc3F)c2=O)nc2c(C(=O)N[C@@H]3CC[C@H]3OC)cnn12 | nan | nan | |
19 | CNc1cc(Nc2cccn(-c3ncco3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | 48.916 | -9.176 | 0.795 | 0.905 | 0.729 | 0.689 | 0.685 | 0.700 | -4.279 | 0.674 | 0.000 | 1.792 | /home/bench-user/docking_results/6nzp_chains_A_no_hetatm_aligned_run_11_20250403180050/smiles_18/candidate_solution_1.sdf | 0.730 | -11.819 | 51538444 | 11.301 | 44 | 10.1021/acs.jmedchem.3c00600 | 0.005 | InChI=1S/C21H22N8O4/c1-22-17-10-16(25-14-4-3-8-28(20(14)31)21-23-7-9-33-21)27-18-12(11-24-29(17)18)19(30)26-13-5-6-15(13)32-2/h3-4,7-11,13,15,22H,5-6H2,1-2H3,(H,25,27)(H,26,30)/t13-,15-/m0/s1 | URVRBHORVICRSW-ZFWWWQNUSA-N | 424893 | US10508120, Compound I-1397::US10577373, Compound I-1397::US11046698, Compound I-1397 | Non-receptor tyrosine-protein kinase TYK2 | Homo sapiens | ChEMBL | 10.7270/Q2FB579X | 37427891 | http://www.bindingdb.org/bind/chemsearch/marvin/MolStructure.jsp?monomerid=424893 | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=pol&polymerid=4916&target=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | http://www.bindingdb.org/jsp/dbsearch/PrimarySearch_ki.jsp?energyterm=kJ/mole&tag=r21&monomerid=424893&enzyme=Non-receptor+tyrosine-protein+kinase+TYK2&column=ki&startPg=0&Increment=50&submit=Search | 137450193.000 | 434150485.000 | 1 | MPLRHWGMARGSKPVGDGAQPMAAMGGLKVLLHWAGPGGGEPWVTFSESSLTAEEVCIHIAHKVGITPPCFNLFALFDAQAQVWLPPNHILEIPRDASLMLYFRIRFYFRNWHGMNPREPAVYRCGPPGTEASSDQTAQGMQLLDPASFEYLFEQGKHEFVNDVASLWELSTEEEIHHFKNESLGMAFLHLCHLALRHGIPLEEVAKKTSFKDCIPRSFRRHIRQHSALTRLRLRNVFRRFLRDFQPGRLSQQMVMVKYLATLERLAPRFGTERVPVCHLRLLAQAEGEPCYIRDSGVAPTDPGPESAAGPPTHEVLVTGTGGIQWWPVEEEVNKEEGSSGSSGRNPQASLFGKKAKAHKAVGQPADRPREPLWAYFCDFRDITHVVLKEHCVSIHRQDNKCLELSLPSRAAALSFVSLVDGYFRLTADSSHYLCHEVAPPRLVMSIRDGIHGPLLEPFVQAKLRPEDGLYLIHWSTSHPYRLILTVAQRSQAPDGMQSLRLRKFPIEQQDGAFVLEGWGRSFPSVRELGAALQGCLLRAGDDCFSLRRCCLPQPGETSNLIIMRGARASPRTLNLSQLSFHRVDQKEITQLSHLGQGTRTNVYEGRLRVEGSGDPEEGKMDDEDPLVPGRDRGQELRVVLKVLDPSHHDIALAFYETASLMSQVSHTHLAFVHGVCVRGPENIMVTEYVEHGPLDVWLRRERGHVPMAWKMVVAQQLASALSYLENKNLVHGNVCGRNILLARLGLAEGTSPFIKLSDPGVGLGALSREERVERIPWLAPECLPGGANSLSTAMDKWGFGATLLEICFDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYEPTQRPSFRTILRDLTRLQPHNLADVLTVNPDSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPSVFSVC | 4PO6,3ZON,5C03,5C01,8TB6,8TB5,3NZ0,7UYU,7UYT,7UYS,7UYR,8S9A,8S99,8S98,7AX4 | TYK2_HUMAN | P29597 | Q6QB10 Q96CH0 | CC(CC1CCC1)C1CCC2CCC(CC3CCCC(C4CCCC4)C3C)CC21 | 1.561 | 119.202 | 187.150 | 140.610 | 450.459 | 450.176 | 12 | 3 | 7 | 3 | 11 | 1 | 12 | 33 | 55 | 2 | 0 | 5 | 4 | 1 | 1 | 4 | 0 | 0 | 0 | 1 | 1 | 0.286 | Non-receptor tyrosine-protein kinase TYK2 | CNc1cc(Nc2cccn(-c3ncco3)c2=O)nc2c(C(=O)N[CH]3CC[CH]3OC)cnn12 | CNc1cc(Nc2cccn(-c3ncco3)c2=O)nc2c(C(=O)N[C@H]3CC[C@@H]3OC)cnn12 | nan | nan |
Save Docking and ADMET Results to SDF
Save all docked ligand poses—including their scores and predicted ADMET properties—into a single SDF file. By consolidating everything into a single file, you ensure that all relevant data is easily accessible for future reference, reproducibility, or further analysis. The save
function also saves the prepared protein used for docking and the coordinates of the docking grid box.
report.save("docking_report")
'docking_report/docking_report_04-03-2025|18:04:32'